a.1.1.3


SCOP classification
 
Class: All alpha proteins
Fold: Globin-like
Superfamily: Globin-like
Family: Phycocyanin-like phycobilisome proteins



Family Members
 
Domain: d2vjhd_ of protein: automated matches from Species: Gloeobacter violaceus [TaxId: 33072]
Domain: d4h0mw_ of protein: automated matches from Species: Synechococcus elongatus [TaxId: 1140]
Domain: d4f0ue_ of protein: automated matches from Species: Synechococcus elongatus [TaxId: 1140]
Domain: d3l0fb_ of protein: Phycocyanin beta subunit from Species: Thermosynechococcus elongatus [TaxId: 197221]
Domain: d1f99m_ of protein: Phycocyanin alpha subunit from Species: Red alga (Polysiphonia urceolata) [TaxId: 65404]
Domain: d1alla_ of protein: Allophycocyanin alpha subunit from Species: Spirulina platensis [TaxId: 118562]
Domain: d4f0uf_ of protein: automated matches from Species: Synechococcus elongatus [TaxId: 1140]
Domain: d1liak_ of protein: Phycoerythrin alpha subunit from Species: Red alga (Polysiphonia urceolata) [TaxId: 65404]
Domain: d2vmlk_ of protein: automated matches from Species: Gloeobacter violaceus [TaxId: 33072]
Domain: d2vjta_ of protein: automated matches from Species: Gloeobacter violaceus [TaxId: 33072]
Domain: d3v58c_ of protein: automated matches from Species: Red alga (Porphyridium purpureum) [TaxId: 35688]
Domain: d1kn1a_ of protein: Allophycocyanin alpha subunit from Species: Red algae (Porphyra yezoensis) [TaxId: 2788]
Domain: d2vjtb_ of protein: automated matches from Species: Gloeobacter violaceus [TaxId: 33072]
Domain: d1f99n_ of protein: Phycocyanin beta subunit from Species: Red alga (Polysiphonia urceolata) [TaxId: 65404]
Domain: d3kvsb_ of protein: automated matches from Species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Domain: d4h0mx_ of protein: automated matches from Species: Synechococcus elongatus [TaxId: 1140]
Domain: d1b33m_ of protein: Allophycocyanin beta subunit from Species: Mastigocladus laminosus [TaxId: 83541]
Domain: d1eyxk_ of protein: Phycoerythrin alpha subunit from Species: Red algae (Gracilaria chilensis) [TaxId: 2775]
Domain: d2bv8p_ of protein: automated matches from Species: Red algae (Gracilaria chilensis) [TaxId: 2775]
Domain: d2vjhc_ of protein: automated matches from Species: Gloeobacter violaceus [TaxId: 33072]
Domain: d1eyxl_ of protein: Phycoerythrin beta subunit from Species: Red algae (Gracilaria chilensis) [TaxId: 2775]
Domain: d1b8dl_ of protein: Phycoerythrin beta subunit from Species: Red alga (Griffithsia monilis) [TaxId: 42003]
Domain: d3dbjh_ of protein: automated matches from Species: Thermosynechococcus vulcanus [TaxId: 32053]
Domain: d4f0tb_ of protein: automated matches from Species: Synechocystis sp. [TaxId: 1111708]
Domain: d4f0ta_ of protein: automated matches from Species: Synechocystis sp. [TaxId: 1111708]
Domain: d2uumx_ of protein: automated matches from Species: Spirulina sp. [TaxId: 1157]
Domain: d3l0fa_ of protein: Phycocyanin alpha subunit from Species: Thermosynechococcus elongatus [TaxId: 197221]
Domain: d4n6sa_ of protein: Phycocyanin alpha subunit from Species: Synechococcus vulcanus [TaxId: 32053]
Domain: d2j96b_ of protein: automated matches from Species: Mastigocladus laminosus [TaxId: 83541]
Domain: d2uumw_ of protein: Phycocyanin alpha subunit from Species: Spirulina sp. [TaxId: 1157]
Domain: d1allb_ of protein: Allophycocyanin beta subunit from Species: Spirulina platensis [TaxId: 118562]
Domain: d1xg0d_ of protein: Phycoerythrin beta subunit from Species: Cryptophyte (Rhodomonas sp. CS24) [TaxId: 79257]
Domain: d1cpck_ of protein: Phycocyanin alpha subunit from Species: Fremyella diplosiphon [TaxId: 1197]
Domain: d4n6sb_ of protein: Phycocyanin beta subunit from Species: Synechococcus vulcanus [TaxId: 32053]
Domain: d1lial_ of protein: Phycoerythrin beta subunit from Species: Red alga (Polysiphonia urceolata) [TaxId: 65404]
Domain: d1b8dk_ of protein: Phycoerythrin alpha subunit from Species: Red alga (Griffithsia monilis) [TaxId: 42003]
Domain: d3dbjg_ of protein: automated matches from Species: Thermosynechococcus vulcanus [TaxId: 32053]
Domain: d3v58d_ of protein: automated matches from Species: Red alga (Porphyridium purpureum) [TaxId: 35688]
Domain: d2bv8o_ of protein: automated matches from Species: Red algae (Gracilaria chilensis) [TaxId: 2775]
Domain: d2c7lb_ of protein: automated matches from Species: Mastigocladus laminosus [TaxId: 83541]
Domain: d1b33l_ of protein: Allophycocyanin alpha subunit from Species: Mastigocladus laminosus [TaxId: 83541]
Domain: d1cpcl_ of protein: Phycocyanin beta subunit from Species: Fremyella diplosiphon [TaxId: 1197]
Domain: d2vmll_ of protein: automated matches from Species: Gloeobacter violaceus [TaxId: 33072]
Domain: d3kvsa_ of protein: automated matches from Species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Domain: d1kn1b_ of protein: Allophycocyanin beta subunit from Species: Red algae (Porphyra yezoensis) [TaxId: 2788]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)