a.28.3.1


SCOP classification
 
Class: All alpha proteins
Fold: Acyl carrier protein-like
Superfamily: Retrovirus capsid dimerization domain-like
Family: Retrovirus capsid protein C-terminal domain



Family Members
 
Domain: d1d1da1 of protein: RSV capsid protein from Species: Rous sarcoma virus [TaxId: 11886]
Domain: d2onta_ of protein: HIV capsid protein, dimerisation domain from Species: Human immunodeficiency virus type 1 [TaxId: 11676]
Domain: d2xt1a_ of protein: automated matches from Species: Human immunodeficiency virus 1 [TaxId: 11676]
Domain: d2jo0a_ of protein: HIV capsid protein, dimerisation domain from Species: Human immunodeficiency virus type 1 [TaxId: 11676]
Domain: d1e6jp1 of protein: HIV capsid protein, dimerisation domain from Species: Human immunodeficiency virus type 1 [TaxId: 11676]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)