a.4.1.3


SCOP classification
 
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: Homeodomain-like
Family: Myb/SANT domain



Family Members
 
Domain: d2qhbb_ of protein: Telomere binding protein TBP1 from Species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Domain: d1a5ja2 of protein: b-Myb DNA binding domain from Species: Chicken (Gallus gallus) [TaxId: 9031]
Domain: d2ajea1 of protein: Telomere repeat-binding protein from Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Domain: d1h8ac1 of protein: v-Myb from Species: Avian myeloblastosis virus [TaxId: 11866]
Domain: d1wgxa_ of protein: Hypothetical protein C14orf106 (KIAA1903) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1ofcx1 of protein: SANT domain of the nucleosome remodeling ATPase ISWI from Species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Domain: d1h8ac2 of protein: v-Myb from Species: Avian myeloblastosis virus [TaxId: 11866]
Domain: d2cjja1 of protein: Radialis from Species: Garden snapdragon (Antirrhinum majus) [TaxId: 4151]
Domain: d2ckxa1 of protein: Telomere binding protein TBP1 from Species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Domain: d2cqra1 of protein: DnaJ homolog subfamily C member 1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1a5ja1 of protein: b-Myb DNA binding domain from Species: Chicken (Gallus gallus) [TaxId: 9031]
Domain: d1ug2a_ of protein: 2610100b20rik gene product from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2crga1 of protein: Metastasis associated protein MTA3 from Species: Mouse (Mus musculus) [TaxId: 10090]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)