a.4.13.2


SCOP classification
 
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: Sigma3 and sigma4 domains of RNA polymerase sigma factors
Family: Sigma4 domain



Family Members
 
Domain: d4g94a_ of protein: automated matches from Species: Staphylococcus aureus [TaxId: 93061]
Domain: d2p7vb_ of protein: Sigma70 (SigA, RpoD) from Species: Escherichia coli [TaxId: 562]
Domain: d2h27d1 of protein: SigmaE factor (RpoE) from Species: Escherichia coli [TaxId: 562]
Domain: d1l0oc_ of protein: SigmaF from Species: Bacillus stearothermophilus [TaxId: 1422]
Domain: d1smyp2 of protein: Sigma70 (SigA, RpoD) from Species: Thermus thermophilus [TaxId: 274]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)