a.4.5.4


SCOP classification
 
Class: All alpha proteins
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: "Winged helix" DNA-binding domain
Family: CAP C-terminal domain-like



Family Members
 
Domain: d2oz6a1 of protein: Cyclic AMP receptor-like protein Vfr from Species: Pseudomonas aeruginosa [TaxId: 287]
Domain: d2gaua1 of protein: Transcriptional regulator PG0396, C-terminal domain from Species: Porphyromonas gingivalis [TaxId: 837]
Domain: d3e6db2 of protein: Chlorophenol reduction protein CprK from Species: Desulfitobacterium hafniense [TaxId: 49338]
Domain: d2h6bb1 of protein: Chlorophenol reduction protein CprK from Species: Desulfitobacterium hafniense [TaxId: 49338]
Domain: d1ft9b1 of protein: CO-sensing protein CooA, C-terminal domain from Species: Rhodospirillum rubrum [TaxId: 1085]
Domain: d1zyba1 of protein: Probable transcription regulator BT4300, C-terminal domain from Species: Bacteroides thetaiotaomicron [TaxId: 818]
Domain: d2h6cb1 of protein: Chlorophenol reduction protein CprK from Species: Desulfitobacterium dehalogenans [TaxId: 36854]
Domain: d2zcwa1 of protein: Transcriptional regulator TTHA1359, C-terminal domain from Species: Thermus thermophilus [TaxId: 274]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)