b.121.4.7


SCOP classification
 
Class: All beta proteins
Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily: Positive stranded ssRNA viruses
Family: Tombusviridae-like VP



Family Members
 
Domain: d2tbvc_ of protein: Tombusvirus coat protein from Species: TBSV (Tomato bushy stunt virus) [TaxId: 12145]
Domain: d1ng0c_ of protein: Sobemovirus coat protein from Species: Cocksfoot mottle virus [TaxId: 40979]
Domain: d4sbvc_ of protein: Sobemovirus coat protein from Species: SBMV (Southern bean mosaic virus), cow pea strain [TaxId: 12139]
Domain: d1c8nc_ of protein: Necrovirus coat protein from Species: TNV (Tobacco necrosis virus) [TaxId: 12054]
Domain: d1f2nc_ of protein: Sobemovirus coat protein from Species: RYMV (Rice yellow mottle virus) [TaxId: 31744]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)