b.36.1.1


SCOP classification
 
Class: All beta proteins
Fold: PDZ domain-like
Superfamily: PDZ domain-like
Family: PDZ domain



Family Members
 
Domain: d3cc0c_ of protein: Segment polarity protein dishevelled homolog Dvl-2 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1x5ra1 of protein: Glutamate receptor interacting protein 2, GRIP2 (KIAA1719) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d3o5nh_ of protein: automated matches from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2yt8a_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1y7na1 of protein: Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2rrma_ of protein: automated matches from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1v5qa_ of protein: Glutamate receptor interacting protein from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1vaea_ of protein: Rhophilin-2 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2vrfd_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d3qjnh_ of protein: Shank1, PDZ domain from Species: Norway rat (Rattus norvegicus) [TaxId: 10116]
Domain: d3pdva_ of protein: automated matches from Species: Homo sapiens, influenza a virus [TaxId: 9606]
Domain: d2csja1 of protein: Tight junction protein ZO-2, Tjp2 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d3axab_ of protein: automated matches from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2pkta_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1ujda_ of protein: Hypothetical protein KIAA0559 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1whda_ of protein: Regulator of G-protein signaling 3, RGS3 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1wi4a1 of protein: Syntaxin binding protein 4 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1wh1a_ of protein: Hypothetical protein KIAA1095 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d3pdza_ of protein: Phosphatase hPTP1e from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2lc7a_ of protein: automated matches from Species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Domain: d1uita_ of protein: Discs large 5 protein KIAA0583 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d3fy5b_ of protein: automated matches from Species: African clawed frog (Xenopus laevis) [TaxId: 8355]
Domain: d1wifa_ of protein: hypothetical PDZ domain containing protein Uqcrc2 (4930408O21Rik) from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1wfva_ of protein: Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1wi2a_ of protein: PDZ domain containing protein 11, Pdzk11 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1wf8a1 of protein: Neurabin-i from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2he2b_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1nf3d_ of protein: GTPase-binding domain of the cell polarity protein par6 (Par-6B) from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2cssa1 of protein: Regulating synaptic membrane exocytosis protein 1, RIMS1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1wfga_ of protein: DNA Regulating synaptic membrane exocytosis protein 2, RIMS2 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1ybob2 of protein: Syntenin 1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1ybob1 of protein: Syntenin 1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1ufxa_ of protein: KIAA1526 protein from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d4h11b_ of protein: automated matches from Species: Norway rat (Rattus norvegicus) [TaxId: 10116]
Domain: d1vj6a1 of protein: Phosphatase hPTP1e from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2wl7a_ of protein: automated matches from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1rgwa_ of protein: Zasp (Cypher, Oracle 1) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1wg6a_ of protein: Partitioning-defective 3-like protein, PAR3-L (RIKEN cDNA 2810455b10) from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1wjla_ of protein: Zasp (Cypher, Oracle 1) from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2w4fa_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d3nfld_ of protein: Tyrosine-protein phosphatase non-receptor type 4, PTPN4 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1wf7a_ of protein: Enigma homolog ENH from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2exga_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1vb7a_ of protein: PDZ-LIM protein mystique from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1v6ba_ of protein: Harmonin from Species: Mouse (Mus musculus) [TaxId: 10090]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)