b.47.1.1


SCOP classification
 
Class: All beta proteins
Fold: Trypsin-like serine proteases
Superfamily: Trypsin-like serine proteases
Family: Prokaryotic proteases



Family Members
 
Domain: d1l1jb_ of protein: Protease Do (DegP, HtrA), catalytic domain from Species: Thermotoga maritima [TaxId: 2336]
Domain: d4jcna_ of protein: automated matches from Species: Staphylococcus epidermidis [TaxId: 176280]
Domain: d1p3ea_ of protein: Glutamyl endopeptidase from Species: Bacillus intermedius [TaxId: 1400]
Domain: d2z9ic2 of protein: Protease PepD from Species: Mycobacterium tuberculosis [TaxId: 1773]
Domain: d2sfaa_ of protein: Serine proteinase from Species: Streptomyces fradiae [TaxId: 1906]
Domain: d2o8la_ of protein: V8 protease from Species: Staphylococcus aureus [TaxId: 1280]
Domain: d1hpga_ of protein: Glutamic acid-specific protease from Species: Streptomyces griseus [TaxId: 1911]
Domain: d1wcza_ of protein: V8 protease from Species: Staphylococcus aureus [TaxId: 1280]
Domain: d1exfa_ of protein: Epidermolytic (exfoliative) toxin A from Species: Staphylococcus aureus [TaxId: 1280]
Domain: d3i78a_ of protein: Trypsin from Species: Streptomyces griseus, strain k1 [TaxId: 1911]
Domain: d5sgae_ of protein: Protease A from Species: Streptomyces griseus, strain k1 [TaxId: 1911]
Domain: d4sgbe_ of protein: Protease B from Species: Streptomyces griseus, strain k1 [TaxId: 1911]
Domain: d3lh3i_ of protein: automated matches from Species: Escherichia coli K-12 [TaxId: 83333]
Domain: d1qtfa_ of protein: Exfoliative toxin B from Species: Staphylococcus aureus [TaxId: 1280]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)