b.47.1.4


SCOP classification
 
Class: All beta proteins
Fold: Trypsin-like serine proteases
Superfamily: Trypsin-like serine proteases
Family: Viral cysteine protease of trypsin fold



Family Members
 
Domain: d2gz8a_ of protein: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) from Species: SARS coronavirus [TaxId: 227859]
Domain: d4f49d_ of protein: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) from Species: Porcine transmissible gastroenteritis coronavirus [TaxId: 11151]
Domain: d2ampb_ of protein: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) from Species: Transmissible gastroenteritis virus [TaxId: 11149]
Domain: d2gt7b_ of protein: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) from Species: SARS coronavirus [TaxId: 227859]
Domain: d2gz7a_ of protein: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) from Species: SARS coronavirus [TaxId: 227859]
Domain: d3d23d_ of protein: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) from Species: Human coronavirus [TaxId: 443239]
Domain: d3osye_ of protein: 3C cysteine protease (picornain 3C) from Species: Human enterovirus 71 [TaxId: 39054]
Domain: d2cxva_ of protein: 3C cysteine protease (picornain 3C) from Species: Human hepatitis a virus hu/northern africa/mbb/1978 [TaxId: 12100]
Domain: d2m5ta_ of protein: automated matches from Species: Rhinovirus c [TaxId: 463676]
Domain: d2op9b_ of protein: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) from Species: SARS coronavirus [TaxId: 227859]
Domain: d2hala_ of protein: 3C cysteine protease (picornain 3C) from Species: Human hepatitis A virus [TaxId: 208726]
Domain: d3zvga_ of protein: automated matches from Species: Human enterovirus [TaxId: 42789]
Domain: d3ruob_ of protein: 3C cysteine protease (picornain 3C) from Species: Human enterovirus b [TaxId: 138949]
Domain: d2gz9a_ of protein: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) from Species: SARS coronavirus [TaxId: 227859]
Domain: d3sjia_ of protein: 3C cysteine protease (picornain 3C) from Species: Human coxsackievirus a16 [TaxId: 31704]
Domain: d3sjoh_ of protein: 3C cysteine protease (picornain 3C) from Species: Human enterovirus 71 [TaxId: 39054]
Domain: d2vj1b_ of protein: automated matches from Species: Human sars coronavirus [TaxId: 227859]
Domain: d3tlob_ of protein: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) from Species: Human coronavirus [TaxId: 443239]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)