b.6.1.0


SCOP classification
 
Class: All beta proteins
Fold: Cupredoxin-like
Superfamily: Cupredoxins
Family: automated matches



Family Members
 
Domain: d3ef4c_ of protein: automated matches from Species: Hyphomicrobium denitrificans [TaxId: 53399]
Domain: d2aana_ of protein: automated matches from Species: Chloroflexus aurantiacus [TaxId: 1108]
Domain: d3mbwb_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2xyba3 of protein: automated matches from Species: Pycnoporus cinnabarinus [TaxId: 5643]
Domain: d2xyba2 of protein: automated matches from Species: Pycnoporus cinnabarinus [TaxId: 5643]
Domain: d2xyba1 of protein: automated matches from Species: Pycnoporus cinnabarinus [TaxId: 5643]
Domain: d4a2ha3 of protein: automated matches from Species: Coriolopsis gallica [TaxId: 76126]
Domain: d4a2ha2 of protein: automated matches from Species: Coriolopsis gallica [TaxId: 76126]
Domain: d2hrha1 of protein: automated matches from Species: Funalia trogii [TaxId: 76130]
Domain: d2hrha2 of protein: automated matches from Species: Funalia trogii [TaxId: 76130]
Domain: d2hrha3 of protein: automated matches from Species: Funalia trogii [TaxId: 76130]
Domain: d4enza4 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2qt6b2 of protein: automated matches from Species: Lentinus tigrinus [TaxId: 5365]
Domain: d3v9ca3 of protein: automated matches from Species: Trametes hirsuta [TaxId: 5327]
Domain: d3v9ca2 of protein: automated matches from Species: Trametes hirsuta [TaxId: 5327]
Domain: d3v9ca1 of protein: automated matches from Species: Trametes hirsuta [TaxId: 5327]
Domain: d3h56a1 of protein: automated matches from Species: Alcaligenes faecalis [TaxId: 511]
Domain: d3h56a2 of protein: automated matches from Species: Alcaligenes faecalis [TaxId: 511]
Domain: d3ppsd1 of protein: automated matches from Species: Thielavia arenaria [TaxId: 113610]
Domain: d3ppsd2 of protein: automated matches from Species: Thielavia arenaria [TaxId: 113610]
Domain: d1x9ub_ of protein: automated matches from Species: Horseradish (Armoracia rusticana) [TaxId: 3704]
Domain: d4enza1 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d4enza3 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d4enza2 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d4enza5 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d4enza6 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d3ppsd3 of protein: automated matches from Species: Thielavia arenaria [TaxId: 113610]
Domain: d4a2ha1 of protein: automated matches from Species: Coriolopsis gallica [TaxId: 76126]
Domain: d3ay2b_ of protein: automated matches from Species: Neisseria gonorrhoeae [TaxId: 242231]
Domain: d2iwkb2 of protein: automated matches from Species: Achromobacter cycloclastes [TaxId: 223]
Domain: d3t71c3 of protein: automated matches from Species: Steccherinum ochraceum [TaxId: 92696]
Domain: d3t71c2 of protein: automated matches from Species: Steccherinum ochraceum [TaxId: 92696]
Domain: d3t71c1 of protein: automated matches from Species: Steccherinum ochraceum [TaxId: 92696]
Domain: d2qt6b1 of protein: automated matches from Species: Lentinus tigrinus [TaxId: 5365]
Domain: d2qt6b3 of protein: automated matches from Species: Lentinus tigrinus [TaxId: 5365]
Domain: d3d12e_ of protein: automated matches from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d3sbrh2 of protein: automated matches from Species: Pseudomonas stutzeri [TaxId: 316]
Domain: d3czub_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d4knuf1 of protein: automated matches from Species: Nitrosomonas europaea [TaxId: 228410]
Domain: d4knuf2 of protein: automated matches from Species: Nitrosomonas europaea [TaxId: 228410]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)