b.60.1.1


SCOP classification
 
Class: All beta proteins
Fold: Lipocalins
Superfamily: Lipocalins
Family: Retinol binding protein-like



Family Members
 
Domain: d1s2pb_ of protein: Alpha-crustacyanin from Species: European lobster (Homarus gammarus) [TaxId: 6707]
Domain: d4k19c_ of protein: Neutrophil gelatinase-associated lipocalin (NGAL) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1s44b_ of protein: Alpha-crustacyanin from Species: European lobster (Homarus gammarus) [TaxId: 6707]
Domain: d3eycd_ of protein: Von Ebner's gland protein (VEGP, tear lipocalin) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d3ojyc_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1hqpa_ of protein: Odorant-binding protein from Species: Pig (Sus scrofa) [TaxId: 9823]
Domain: d4hpda_ of protein: Nitrophorin 4 from Species: Rhodnius prolixus [TaxId: 13249]
Domain: d4np1b_ of protein: Nitrophorin 1 from Species: Rhodnius prolixus [TaxId: 13249]
Domain: d1kt7a_ of protein: Retinol binding protein from Species: Cow (Bos taurus) [TaxId: 9913]
Domain: d1z24a1 of protein: Insecticyanin from Species: Tobacco hornworm (Manduca sexta) [TaxId: 7130]
Domain: d2l9ca_ of protein: automated matches from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1exsa_ of protein: beta-Lactoglobulin from Species: Pig (Sus scrofa) [TaxId: 9823]
Domain: d2dm5a_ of protein: Major urinary protein/alpha-2u-globulin from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d3kfia_ of protein: automated matches from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2lbva_ of protein: Lipocalin q83 from Species: Coturnix japonica [TaxId: 93934]
Domain: d1yuph_ of protein: beta-Lactoglobulin from Species: Reindeer (Rangifer tarandus) [TaxId: 9870]
Domain: d2nnea_ of protein: automated matches from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2hysa_ of protein: Nitrophorin 2 (prolixin-s) from Species: Rhodnius prolixus [TaxId: 13249]
Domain: d1epbb_ of protein: Retinoic acid-binding protein from Species: Norway rat (Rattus norvegicus) [TaxId: 10116]
Domain: d2ozqa_ of protein: Major urinary protein/alpha-2u-globulin from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2k23a_ of protein: automated matches from Species: Norway rat (Rattus norvegicus) [TaxId: 10116]
Domain: d1gm6a_ of protein: Salivary lipocalin from Species: Pig (Sus scrofa) [TaxId: 9823]
Domain: d4alob_ of protein: automated matches from Species: American lobster (Homarus americanus) [TaxId: 6706]
Domain: d1e5pd_ of protein: Aphrodisin, a sex pheromone from Species: Golden hamster (Mesocricetus auratus) [TaxId: 10036]
Domain: d4nljb_ of protein: automated matches from Species: Sheep (Ovis aries) [TaxId: 9940]
Domain: d3zq3d_ of protein: automated matches from Species: Norway rat (Rattus norvegicus) [TaxId: 10116]
Domain: d1bj7a_ of protein: Lipocalin allergen from Species: Cow (Bos taurus), bos d 2 [TaxId: 9913]
Domain: d1ew3a_ of protein: Lipocalin allergen from Species: Horse (Equus caballus), equ c 1 [TaxId: 9796]
Domain: d3u9pd_ of protein: automated matches from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1iiua_ of protein: Retinol binding protein from Species: Chicken (Gallus gallus), plasma isoform [TaxId: 9031]
Domain: d2joza1 of protein: Hypothetical protein YxeF from Species: Bacillus subtilis [TaxId: 1423]
Domain: d3saob_ of protein: automated matches from Species: Chicken (Gallus gallus) [TaxId: 9031]
Domain: d2a2ud_ of protein: Major urinary protein/alpha-2u-globulin from Species: Norway rat (Rattus norvegicus) [TaxId: 10116]
Domain: d1yp7a_ of protein: Major urinary protein/alpha-2u-globulin from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1aqba_ of protein: Retinol binding protein from Species: Pig (Sus scrofa) [TaxId: 9823]
Domain: d1t0va1 of protein: Bilin-binding protein from Species: Cabbage butterfly (Pieris brassicae) [TaxId: 7116]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)