b.80.1.3


SCOP classification
 
Class: All beta proteins
Fold: Single-stranded right-handed beta-helix
Superfamily: Pectin lyase-like
Family: Galacturonase



Family Members
 
Domain: d1nhcf_ of protein: Polygalacturonase from Species: Fungus (Aspergillus niger), endo-polygalacturonase I [TaxId: 5061]
Domain: d1czfb_ of protein: Polygalacturonase from Species: Fungus (Aspergillus niger), endo-polygalacturonase II [TaxId: 5061]
Domain: d1bhea_ of protein: Polygalacturonase from Species: Erwinia carotovora, subsp. carotovora [TaxId: 554]
Domain: d2iq7g_ of protein: automated matches from Species: Colletotrichum lupini [TaxId: 145971]
Domain: d1kcda_ of protein: Polygalacturonase from Species: Fungus (Stereum purpureum), endo-polygalacturonase I [TaxId: 58369]
Domain: d1ib4b_ of protein: Polygalacturonase from Species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Domain: d1rmga_ of protein: Rhamnogalacturonase A from Species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Domain: d1hg8a_ of protein: Polygalacturonase from Species: Fusarium moniliforme [TaxId: 117187]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)