c.1.8.0


SCOP classification
 
Class: Alpha and beta proteins (a/b)
Fold: TIM beta/alpha-barrel
Superfamily: (Trans)glycosidases
Family: automated matches



Family Members
 
Domain: d2whja_ of protein: automated matches from Species: Bacillus agaradhaerens [TaxId: 76935]
Domain: d3ogva1 of protein: automated matches from Species: Trichoderma reesei [TaxId: 51453]
Domain: d3lmyb2 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d4jcla1 of protein: automated matches from Species: Paenibacillus macerans [TaxId: 44252]
Domain: d1vbub_ of protein: automated matches from Species: Thermotoga maritima [TaxId: 2336]
Domain: d4ek7b_ of protein: automated matches from Species: Rauvolfia serpentina [TaxId: 4060]
Domain: d4aiea1 of protein: automated matches from Species: Lactobacillus acidophilus [TaxId: 272621]
Domain: d2z1sa_ of protein: automated matches from Species: Paenibacillus polymyxa [TaxId: 1406]
Domain: d4b16a_ of protein: automated matches from Species: Tamarindus indica [TaxId: 58860]
Domain: d3rjya_ of protein: automated matches from Species: Fervidobacterium nodosum [TaxId: 381764]
Domain: d4jcma1 of protein: automated matches from Species: Bacillus clarkii [TaxId: 79879]
Domain: d3u7be_ of protein: automated matches from Species: Fungus (Fusarium oxysporum) [TaxId: 5507]
Domain: d4b3lf_ of protein: automated matches from Species: Streptococcus pyogenes [TaxId: 1314]
Domain: d3oiha_ of protein: automated matches from Species: Scadoxus multiflorus [TaxId: 82246]
Domain: d3vupb_ of protein: automated matches from Species: Aplysia kurodai [TaxId: 6501]
Domain: d2atma_ of protein: automated matches from Species: Vespula vulgaris [TaxId: 7454]
Domain: d4f8xa_ of protein: automated matches from Species: Penicillium canescens [TaxId: 5083]
Domain: d2xvnc_ of protein: automated matches from Species: Aspergillus fumigatus [TaxId: 5085]
Domain: d3vm7a1 of protein: automated matches from Species: Malbranchea cinnamomea [TaxId: 5041]
Domain: d3vipa_ of protein: automated matches from Species: Neotermes koshunensis [TaxId: 60586]
Domain: d4hzmb_ of protein: automated matches from Species: Salmonella enterica [TaxId: 99287]
Domain: d3pzvd_ of protein: automated matches from Species: Bacillus subtilis [TaxId: 224308]
Domain: d4n42a_ of protein: automated matches from Species: Scadoxus multiflorus [TaxId: 82246]
Domain: d3mu7a_ of protein: automated matches from Species: Scadoxus multiflorus [TaxId: 82246]
Domain: d3w53a_ of protein: automated matches from Species: Micrococcus antarcticus [TaxId: 86171]
Domain: d4ee9a_ of protein: automated matches from Species: Uncultured bacterium [TaxId: 77133]
Domain: d4gzef_ of protein: automated matches from Species: Lactobacillus plantarum [TaxId: 1590]
Domain: d3hjea1 of protein: automated matches from Species: Sulfolobus tokodaii [TaxId: 273063]
Domain: d2x8rf_ of protein: automated matches from Species: Aspergillus fumigatus [TaxId: 330879]
Domain: d4duxd3 of protein: automated matches from Species: Escherichia coli K-12 [TaxId: 83333]
Domain: d3ptqb_ of protein: automated matches from Species: Rice (Oryza sativa) [TaxId: 4530]
Domain: d2e40b_ of protein: automated matches from Species: Basidomycetes fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Domain: d2cksb_ of protein: automated matches from Species: Thermobifida fusca [TaxId: 2021]
Domain: d2waga_ of protein: automated matches from Species: Bacillus anthracis [TaxId: 198094]
Domain: d3mmwd_ of protein: automated matches from Species: Thermotoga maritima [TaxId: 2336]
Domain: d2xhyd_ of protein: automated matches from Species: Escherichia coli K-12 [TaxId: 83333]
Domain: d2depb_ of protein: automated matches from Species: Clostridium stercorarium [TaxId: 1510]
Domain: d4iuga1 of protein: automated matches from Species: Fungus (Aspergillus oryzae) [TaxId: 5062]
Domain: d4cd5a_ of protein: automated matches from Species: Cellvibrio japonicus [TaxId: 498211]
Domain: d3hmca_ of protein: automated matches from Species: Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
Domain: d4ipne_ of protein: automated matches from Species: Streptococcus pneumoniae [TaxId: 170187]
Domain: d2zida1 of protein: automated matches from Species: Streptococcus mutans
Domain: d2ze0a1 of protein: automated matches from Species: Geobacillus sp. [TaxId: 258999]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)