c.55.3.5


SCOP classification
 
Class: Alpha and beta proteins (a/b)
Fold: Ribonuclease H-like motif
Superfamily: Ribonuclease H-like
Family: DnaQ-like 3'-5' exonuclease



Family Members
 
Domain: d2ajqf1 of protein: Exonuclease domain of T7 DNA polymerase from Species: Bacteriophage T7 [TaxId: 10760]
Domain: d3tr8b_ of protein: automated matches from Species: Coxiella burnetii [TaxId: 777]
Domain: d1yt3a3 of protein: Ribonuclease D, catalytic domain from Species: Escherichia coli [TaxId: 562]
Domain: d2kzza1 of protein: Exonuclease domain of prokaryotic DNA polymerase from Species: Escherichia coli [TaxId: 562]
Domain: d2xy8a_ of protein: automated matches from Species: Escherichia coli [TaxId: 562]
Domain: d1wlja_ of protein: Interferon-stimulated gene 20 kDa protein, ISG20 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1nozb_ of protein: Exonuclease domain of family B DNA polymerases from Species: Bacteriophage T4 [TaxId: 10665]
Domain: d1j9aa_ of protein: Oligoribonuclease from Species: Haemophilus influenzae [TaxId: 727]
Domain: d1s5ja1 of protein: Exonuclease domain of family B DNA polymerases from Species: Sulfolobus solfataricus [TaxId: 2287]
Domain: d4bdpa1 of protein: Exonuclease domain of prokaryotic DNA polymerase from Species: Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422]
Domain: d2xhba1 of protein: automated matches from Species: Thermococcus gorgonarius [TaxId: 71997]
Domain: d2q3sf_ of protein: Hypothetical protein AT5G06450 from Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Domain: d5ktqa1 of protein: Exonuclease domain of prokaryotic DNA polymerase from Species: Thermus aquaticus [TaxId: 271]
Domain: d1y97b_ of protein: Three prime repair exonuclease 2, TREX2 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1qqca1 of protein: Exonuclease domain of family B DNA polymerases from Species: Desulfurococcus tok [TaxId: 108142]
Domain: d2f96b_ of protein: Ribonuclease T from Species: Pseudomonas aeruginosa [TaxId: 287]
Domain: d2pzsd1 of protein: Exonuclease domain of phi29 DNA polymerase from Species: Bacteriophage phi-29 [TaxId: 10756]
Domain: d2igib_ of protein: Oligoribonuclease from Species: Escherichia coli [TaxId: 562]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)