d.15.1.1


SCOP classification
 
Class: Alpha and beta proteins (a+b)
Fold: beta-Grasp (ubiquitin-like)
Superfamily: Ubiquitin-like
Family: Ubiquitin-related



Family Members
 
Domain: d1wgda_ of protein: Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, HERPUD1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1wgga_ of protein: Ubiquitin carboxyl-terminal hydrolase 14 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1v5ta_ of protein: 8430435i17rik protein from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1we6a_ of protein: Splicing factor 3 subunit 1, C-terminal domain from Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Domain: d4bbnf_ of protein: automated matches from Species: Cow (Bos taurus) [TaxId: 9913]
Domain: d1wh3a_ of protein: 2'-5'-oligoadenylate synthetase-like protein, OASL from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1wx8a1 of protein: 4931431F19Rik from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d4ii3d_ of protein: automated matches from Species: Schizosaccharomyces pombe [TaxId: 284812]
Domain: d4ljpb_ of protein: Ubiquitin from Species: Cow (Bos taurus) [TaxId: 9913]
Domain: d1bt0a_ of protein: Rub1 from Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Domain: d2wyqa_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1uh6a_ of protein: Ubiquitin-like protein 5, ubl5 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1x1ma1 of protein: Ubiquitin-like protein 7 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d3uipb_ of protein: SUMO-1 (smt3 homologue) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2m17a_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1uela_ of protein: Ubiquitin-like domain of Rad23 homolog B (Hhr23B) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1v5oa_ of protein: 1700011n24rik protein from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2kdec_ of protein: automated matches from Species: African clawed frog (Xenopus laevis) [TaxId: 8355]
Domain: d3tble_ of protein: Ubiquitin from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1se9a_ of protein: Hypothetical protein At3g01050 from Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Domain: d4eewb_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d3vhtc_ of protein: Ubiquitin from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1wgha_ of protein: Ubiquitin-like protein 3, Ubl3 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d4gu2a_ of protein: automated matches from Species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]
Domain: d1v2ya_ of protein: Ubiquitin-like protein 3300001g02rik from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1j8ca_ of protein: Ubiquitin-like N-terminal domain of PLIC-2 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1wiaa_ of protein: Ubiquitin-like protein bab25500 (2010008E23Rik) from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d4ap4f_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2k1fa_ of protein: SUMO-1 (smt3 homologue) from Species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Domain: d3sdld2 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1we7a_ of protein: Splicing factor 3 subunit 1, C-terminal domain from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1wjna_ of protein: Tubulin-folding protein TbcE from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d3prpd_ of protein: Ubiquitin from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1wf9a1 of protein: NPL4-like protein 1 from Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Domain: d1wjua_ of protein: NEDD8 ultimate buster-1, NUB1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d4jghb_ of protein: automated matches from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1v86a_ of protein: hypothetical D7wsu128e protein from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d3m3jf_ of protein: Ubiquitin from Species: Cow (Bos taurus) [TaxId: 9913]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)