d.22.1.1


SCOP classification
 
Class: Alpha and beta proteins (a+b)
Fold: GFP-like
Superfamily: GFP-like
Family: Fluorescent proteins



Family Members
 
Domain: d3nezd_ of protein: automated matches from Species: Coral (Discosoma sp.) [TaxId: 86600]
Domain: d4edsb_ of protein: automated matches from Species: Sea anemone (Entacmaea quadricolor) [TaxId: 6118]
Domain: d2vzxh_ of protein: automated matches from Species: Dendronephthya sp. [TaxId: 191210]
Domain: d3lvdb_ of protein: automated matches from Species: Aequorea coerulescens [TaxId: 210840]
Domain: d4h3na_ of protein: automated matches from Species: Discosoma sp. [TaxId: 301246]
Domain: d3ir8b_ of protein: automated matches from Species: Montipora sp. [TaxId: 321802]
Domain: d2rh7d_ of protein: Green fluorescent protein, GFP from Species: Renilla reniformis [TaxId: 6136]
Domain: d3pj7d_ of protein: automated matches from Species: Sea anemone (Entacmaea quadricolor) [TaxId: 6118]
Domain: d2hpwa_ of protein: Green fluorescent protein, GFP from Species: Clytia gregaria [TaxId: 27801]
Domain: d2c9ih_ of protein: automated matches from Species: Sea anemone (Anemonia sulcata) [TaxId: 6108]
Domain: d2h5qa_ of protein: automated matches from Species: Coral (Discosoma sp.) [TaxId: 86600]
Domain: d3adfb_ of protein: Green fluorescent protein, GFP from Species: Galaxea fascicularis [TaxId: 46745]
Domain: d4edob_ of protein: automated matches from Species: Sea anemone (Entacmaea quadricolor) [TaxId: 6118]
Domain: d3cglf_ of protein: automated matches from Species: Discosoma striata
Domain: d1yzwd_ of protein: automated matches from Species: Heteractis crispa [TaxId: 175771]
Domain: d3pibd_ of protein: automated matches from Species: Sea anemone (Entacmaea quadricolor) [TaxId: 6118]
Domain: d3vk1a_ of protein: automated matches from Species: Coral (Montipora efflorescens) [TaxId: 105610]
Domain: d3u0na_ of protein: automated matches from Species: Sea anemone (Entacmaea quadricolor) [TaxId: 6118]
Domain: d3pjbb_ of protein: automated matches from Species: Sea anemone (Entacmaea quadricolor) [TaxId: 6118]
Domain: d3pj5b_ of protein: automated matches from Species: Sea anemone (Entacmaea quadricolor) [TaxId: 6118]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)