d.6.1.1


SCOP classification
 
Class: Alpha and beta proteins (a+b)
Fold: Prion-like
Superfamily: Prion-like
Family: Prion-like



Family Members
 
Domain: d1xyka_ of protein: Prion protein domain from Species: Dog (Canis familiaris) [TaxId: 9615]
Domain: d1xyqa_ of protein: Prion protein domain from Species: Pig (Sus scrofa) [TaxId: 9823]
Domain: d1lg4a_ of protein: Prion-like protein Doppel from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d3o79b_ of protein: Prion protein domain from Species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Domain: d1u5la_ of protein: Prion protein domain from Species: Red-eared slider turtle (Trachemys scripta) [TaxId: 34903]
Domain: d2kfla_ of protein: Prion protein domain from Species: Macropus eugenii [TaxId: 9315]
Domain: d1xyja_ of protein: Prion protein domain from Species: Cat (Felis catus) [TaxId: 9685]
Domain: d1xu0a_ of protein: Prion protein domain from Species: African clawed frog (Xenopus laevis) [TaxId: 8355]
Domain: d2k56a_ of protein: automated matches from Species: Myodes glareolus [TaxId: 447135]
Domain: d2ku4a_ of protein: automated matches from Species: Horse (Equus caballus) [TaxId: 9796]
Domain: d1u3ma_ of protein: Prion protein domain from Species: Chicken (Gallus gallus) [TaxId: 9031]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)