d.92.1.11


SCOP classification
 
Class: Alpha and beta proteins (a+b)
Fold: Zincin-like
Superfamily: Metalloproteases ("zincins"), catalytic domain
Family: Matrix metalloproteases, catalytic domain



Family Members
 
Domain: d2y6da_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d4ilwf_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d3ma2d_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d4ijoa_ of protein: Macrophage elastase (MMP-12) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1rm8a_ of protein: Matrix metalloproteinase-16 (MMP-16) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d4ja1b_ of protein: Stromelysin-1 (MMP-3) from Species: Human (Homo sapiens), fibroblast [TaxId: 9606]
Domain: d830cb_ of protein: Collagenase-3 (MMP-13) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1hv5f_ of protein: Stromelysin-3 (MMP-11) from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d966ca_ of protein: Fibroblast collagenase (MMP-1) from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1fbla2 of protein: Fibroblast collagenase (MMP-1) from Species: Pig (Sus scrofa) [TaxId: 9823]
Domain: d3tt4a_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1cxvb_ of protein: Collagenase-3 (MMP-13) from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2jsda_ of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)