g.37.1.1


SCOP classification
 
Class: Small proteins
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: Classic zinc finger, C2H2



Family Members
 
Domain: d2yt9a2 of protein: PATZ1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2yt9a3 of protein: PATZ1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2csha1 of protein: Zinc finger protein 297b from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2yu8a1 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2ctda1 of protein: Zinc finger protein 512, ZNF512 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2dmda1 of protein: Zinc finger protein 64, ZFP68 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2csha2 of protein: Zinc finger protein 297b from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2ytma1 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2cota1 of protein: Zinc finger and SCAN domain-containing protein 16, ZSCAN16 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2cota2 of protein: Zinc finger and SCAN domain-containing protein 16, ZSCAN16 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2dlka1 of protein: Zinc finger protein 692, ZNF692 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2dlka2 of protein: Zinc finger protein 692, ZNF692 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1yuja_ of protein: GAGA factor from Species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Domain: d1wjpa2 of protein: Zinc finger protein 295, ZNF295 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1wjpa3 of protein: Zinc finger protein 295, ZNF295 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1wjpa1 of protein: Zinc finger protein 295, ZNF295 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1znfa_ of protein: XFIN, third domain from Species: African clawed frog (Xenopus laevis) [TaxId: 8355]
Domain: d2ytha1 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2yt9a1 of protein: PATZ1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2adra1 of protein: ADR1 from Species: Synthetic, based on Saccharomyces cerevisiae sequence
Domain: d2adra2 of protein: ADR1 from Species: Synthetic, based on Saccharomyces cerevisiae sequence
Domain: d1va3a_ of protein: Transcription factor sp1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1zaac1 of protein: ZIF268 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1zaac3 of protein: ZIF268 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1zaac2 of protein: ZIF268 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1zfda_ of protein: SWI5 zinc-finger domains from Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Domain: d2dmda3 of protein: Zinc finger protein 64, ZFP68 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2dmda2 of protein: Zinc finger protein 64, ZFP68 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2ytsa1 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d4znfa_ of protein: Enhancer binding protein from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2enta1 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2ee8a_ of protein: automated matches from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2drpd1 of protein: Tramtrack protein (two zinc-finger peptide) from Species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Domain: d2ytba1 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2drpd2 of protein: Tramtrack protein (two zinc-finger peptide) from Species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Domain: d2ytga1 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d7znfa_ of protein: ZFY from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2ct1a2 of protein: Transcriptional repressor CTCF from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1x3ca1 of protein: Zinc finger protein 292, ZNF292 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1x6fa1 of protein: Zinc finger protein 462, ZNF462 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2ctda2 of protein: Zinc finger protein 512, ZNF512 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2ct1a1 of protein: Transcriptional repressor CTCF from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2ytqa1 of protein: automated matches from Species: Human (Homo sapiens) [TaxId: 9606]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)