g.39.1.3


SCOP classification
 
Class: Small proteins
Fold: Glucocorticoid receptor-like (DNA-binding domain)
Superfamily: Glucocorticoid receptor-like (DNA-binding domain)
Family: LIM domain



Family Members
 
Domain: d1x61a2 of protein: Thyroid receptor interacting protein 6, TRIP6 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2dj7a2 of protein: Actin-binding LIM protein 3, abLIM-3 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2cu8a2 of protein: Cysteine-rich (intestinal) protein, CRP, CRIP from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2cu8a1 of protein: Cysteine-rich (intestinal) protein, CRP, CRIP from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2dloa1 of protein: Thyroid receptor interacting protein 6, TRIP6 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1imla2 of protein: Cysteine-rich (intestinal) protein, CRP, CRIP from Species: Rat (Rattus rattus) [TaxId: 10117]
Domain: d1ctla1 of protein: Cysteine-rich (intestinal) protein, CRP, CRIP from Species: Chicken (Gallus gallus) [TaxId: 9031]
Domain: d1ctla2 of protein: Cysteine-rich (intestinal) protein, CRP, CRIP from Species: Chicken (Gallus gallus) [TaxId: 9031]
Domain: d2dj7a1 of protein: Actin-binding LIM protein 3, abLIM-3 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2d8ya1 of protein: Eplin, LIMA1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1x68a2 of protein: Four and a half LIM domains protein 5, FHL-5 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1x61a1 of protein: Thyroid receptor interacting protein 6, TRIP6 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1x68a1 of protein: Four and a half LIM domains protein 5, FHL-5 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2dloa2 of protein: Thyroid receptor interacting protein 6, TRIP6 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1qlia2 of protein: Cysteine-rich (intestinal) protein, CRP, CRIP from Species: Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]
Domain: d1qlia1 of protein: Cysteine-rich (intestinal) protein, CRP, CRIP from Species: Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]
Domain: d2dara2 of protein: PDZ and LIM domain protein 5, Enigma from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2dara1 of protein: PDZ and LIM domain protein 5, Enigma from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1x3ha1 of protein: Leupaxin from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1x64a1 of protein: PDZ and LIM domain protein 3, PDLIM3 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d1imla1 of protein: Cysteine-rich (intestinal) protein, CRP, CRIP from Species: Rat (Rattus rattus) [TaxId: 10117]
Domain: d1x3ha2 of protein: Leupaxin from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d1x64a2 of protein: PDZ and LIM domain protein 3, PDLIM3 from Species: Mouse (Mus musculus) [TaxId: 10090]
Domain: d2d8ya2 of protein: Eplin, LIMA1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2cura1 of protein: Four and a half LIM domains protein 1, FHL-1 from Species: Human (Homo sapiens) [TaxId: 9606]
Domain: d2cura2 of protein: Four and a half LIM domains protein 1, FHL-1 from Species: Human (Homo sapiens) [TaxId: 9606]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)