g.40.1.1


SCOP classification
 
Class: Small proteins
Fold: Retrovirus zinc finger-like domains
Superfamily: Retrovirus zinc finger-like domains
Family: Retrovirus zinc finger-like domains



Family Members
 
Domain: d1a1ta_ of protein: HIV nucleocapsid from Species: Human immunodeficiency virus type 1, different isolates [TaxId: 11676]
Domain: d2ec7a_ of protein: automated matches from Species: Human immunodeficiency virus type 2 (isolate ghana-1) [TaxId: 11717]
Domain: d1bj6a_ of protein: HIV nucleocapsid from Species: Human immunodeficiency virus type 1, different isolates [TaxId: 11676]
Domain: d1dsva_ of protein: Nucleic acid binding protein p14 from Species: Mouse mammary tumor virus [TaxId: 11757]
Domain: d2znfa_ of protein: GAG protein p55 from Species: Synthetic, based on Human immunodeficiency virus
Domain: d1wwga_ of protein: automated matches from Species: Murine leukemia virus [TaxId: 11801]
Domain: d1aafa_ of protein: HIV nucleocapsid from Species: Human immunodeficiency virus type 1, different isolates [TaxId: 11676]



Multiple structure based alignment (Multiprot)


Multiple Structure based Sequence alignment
Multiple Structure based Sequence alignment (HHAlign)
Integrated Structure-Sequence alignment (ClustalO)
Integrated Structure-Sequence alignment (HMMalign)


Phylogenetic Representation
Strucuture based Phylogenetic tree (Using SDM) Strucuture based Phylogenetic tree (Using TM)